我这里仅列出排名前10位的文章，可以看出引用率较高的文章大多为方法性的文章。

MOLECULAR & CELLULAR PROTEOMICS (IF 9.624)
1. Gruhler A, Olsen JV, Mohammed S, et al.
Quantitative phosphoproteomics applied to the yeast pheromone signaling pathway
MOLECULAR & CELLULAR PROTEOMICS 4 (3): 310-327 MAR 2005
Times Cited: 34

2. Denison C, Rudner AD, Gerber SA, et al.
A proteomic strategy for gaining insights into protein sumoylation in yeast
MOLECULAR & CELLULAR PROTEOMICS 4 (3): 246-254 MAR 2005
Times Cited: 19

3. Loyet KM, Stults JT, Arnott D
Mass spectrometric contributions to the practice of phosphorylation site mapping through 2003 - A literature review
MOLECULAR & CELLULAR PROTEOMICS 4 (3): 235-245 MAR 2005
Times Cited: 15

4. Pan S, Zhang H, Rush J, et al.
High throughput proteome screening for biomarker detection
MOLECULAR & CELLULAR PROTEOMICS 4 (2): 182-190 FEB 2005
Times Cited: 15

5. Sauer G, Korner R, Hanisch A, et al.
Proteome analysis of the human mitotic spindle
MOLECULAR & CELLULAR PROTEOMICS 4 (1): 35-43 JAN 2005
Times Cited: 12

6. Sheehan KM, Calvert VS, Kay EW, et al.
Use of reverse phase protein microarrays and reference standard development for molecular network analysis of metastatic ovarian carcinoma
MOLECULAR & CELLULAR PROTEOMICS 4 (4): 346-355 APR 2005
Times Cited: 10

7. Vincensini L, Richert S, Blisnick T, et al.
Proteomic analysis identifies novel proteins of the Maurer's clefts, a secretory compartment delivering Plasmodium falciparum proteins to the surface of its host cell
MOLECULAR & CELLULAR PROTEOMICS 4 (4): 582-593 APR 2005
Times Cited: 9

8. Kolkman A, Dirksen EHC, Slijper M, et al.
Double standards in quantitative proteomics - Direct comparative assessment of difference in gel electrophoresis and metabolic stable isotope labeling
MOLECULAR & CELLULAR PROTEOMICS 4 (3): 255-266 MAR 2005
Times Cited: 9

9. Rosas-Acosta G, Russell WK, Deyrieux A, et al.
A universal strategy for proteomic studies of SUMO and other ubiquitin-like modifiers
MOLECULAR & CELLULAR PROTEOMICS 4 (1): 56-72 JAN 2005
Times Cited: 9

10. Qian WJ, Monroe ME, Liu T, et al.
Quantitative proteome analysis of human plasma following in vivo lipopolysaccharide administration using O-16/O-18 labeling and the accurate mass and time tag approach
MOLECULAR & CELLULAR PROTEOMICS 4 (5): 700-709 MAY 2005
Times Cited: 8


JOURNAL OF PROTEOME RESEARCH（ IF:6.917)
1. Qian WJ, Liu T, Monroe ME, et al.
Probability-based evaluation of peptide and protein identifications from tandem mass spectrometry and SEQUEST analysis: The human proteome
JOURNAL OF PROTEOME RESEARCH 4 (1): 53-62 JAN-FEB 2005
Times Cited: 22

2. DeSouza L, Diehl G, Rodrigues MJ, et al.
Search for cancer markers from endometrial tissues using differentially labeled tags iTRAQ and clCAT with multidimensional liquid chromatography and tandem mass spectrometry
JOURNAL OF PROTEOME RESEARCH 4 (2): 377-386 MAR-APR 2005
Times Cited: 12

3. Wilson ID, Nicholson JK, Castro-Perez J, et al.
High resolution "Ultra performance" liquid chromatography coupled to oa-TOF mass spectrometry as a tool for differential metabolic pathway profiling in functional genomic studies
JOURNAL OF PROTEOME RESEARCH 4 (2): 591-598 MAR-APR 2005
Times Cited: 10

4. Hansen BT, Davey SW, Ham AJL, et al.
P-mod: An algorithm and software to map modifications to peptide sequences using tandem MS data
JOURNAL OF PROTEOME RESEARCH 4 (2): 358-368 MAR-APR 2005
Times Cited: 7

5. Ji CJ, Li L
Quantitative proteome analysis using differential stable isotopic labeling and microbore LC-MALDI MS and MS/MS
JOURNAL OF PROTEOME RESEARCH 4 (3): 734-742 MAY-JUN 2005
Times Cited: 6

6. Balyasnikova IV, Woodman ZL, Albrecht RF, et al.
Localization of an N-domain region of angiotensin-converting enzyme involved in the regulation of ectodomain shedding using monoclonal antibodies
JOURNAL OF PROTEOME RESEARCH 4 (2): 258-267 MAR-APR 2005
Times Cited: 6

7. Snijders APL, de Vos MGJ, Wright PC
Novel approach for peptide quantitation and sequencing based on N-15 and C-13 metabolic labeling
JOURNAL OF PROTEOME RESEARCH 4 (2): 578-585 MAR-APR 2005
Times Cited: 6

8. Hogan JM, Pitteri SJ, Chrisman PA, et al.
Complementary structural information from a tryptic N-linked glycopeptide via electron transfer ion/ion reactions and collision-induced dissociation
JOURNAL OF PROTEOME RESEARCH 4 (2): 628-632 MAR-APR 2005
Times Cited: 6

9. Hsu JL, Huang SY, Shiea JT, et al.
Beyond quantitative proteomics: Signal enhancement of the a(1) ion as a mass tag for peptide sequencing using dimethyl labeling
JOURNAL OF PROTEOME RESEARCH 4 (1): 101-108 JAN-FEB 2005
Times Cited: 6

10. van Balkom BWM, van Gestel RA, Brouwers JFHM, et al.
Mass spectrometric analysis of the Schistosoma mansoni tegumental sub-proteome
JOURNAL OF PROTEOME RESEARCH 4 (3): 958-966 MAY-JUN 2005
Times Cited: 5

PROTEOMICS (IF 5.483)
1. Bjorhall K, Miliotis T, Davidsson P
Comparison of different depletion strategies for improved resolution in proteomic analysis of human serum samples
PROTEOMICS 5 (1): 307-317 JAN 2005
Times Cited: 15

2. Qian WJ, Jacobs JM, Camp DG, et al.
Comparative proteome analyses of human plasma following in vivo lipopolysaccharide administration using multidimensional separations coupled with tandem mass spectrometry
PROTEOMICS 5 (2): 572-584 FEB 2005
Times Cited: 13

3. Vosseller K, Hansen KC, Chalkley RJ, et al.
Quantitative analysis of both protein expression and serine/threonine post-translational modifications through stable isotope labeling with dithiothreitol
PROTEOMICS 5 (2): 388-398 FEB 2005
Times Cited: 12

4. Hu S, Xie YM, Ramachandran P, et al.
Large-scale identification of proteins in human salivary proteome by liquid chromatography/mass spectrometry and two-dimensional gel electrophoresis-mass spectrometry
PROTEOMICS 5 (6): 1714-1728 APR 2005
Times Cited: 11

5. Angenendt P, Lehrach H, Kreutzberger J, et al.
Subnanoliter enzymatic assays on microarrays
PROTEOMICS 5 (2): 420-425 FEB 2005
Times Cited: 11

6. Schmidt A, Kellermann J, Lottspeich F
A novel strategy for quantitative proteornics using isotope-coded protein labels
PROTEOMICS 5 (1): 4-15 JAN 2005
Times Cited: 11

7. Yan SP, Tang ZC, Su W, et al.
Proteornic analysis of salt stress-responsive proteins in rice root
PROTEOMICS 5 (1): 235-244 JAN 2005
Times Cited: 9

8. Giavalisco P, Nordhoff E, Kreitler T, et al.
Proteome analysis of Arabidopsis thaliana by two-dimensional gel electrophoresis and matrix-assisted laser desorption/ionisation-time of flight mass spectrometry
PROTEOMICS 5 (7): 1902-1913 MAY 2005
Times Cited: 8

9. Marengo E, Robotti E, Antonucci F, et al.
Numerical approaches for quantitative analysis of two-dimensional maps: A review of commercial software and home-made systems
PROTEOMICS 5 (3): 654-666 FEB 2005
Times Cited: 8

10. Godovac-Zimmermann J, Kleiner O, Brown LR, et al.
Perspectives in spicing up proteomics with splicing
PROTEOMICS 5 (3): 699-709 FEB 2005
Times Cited: 8